Peer review process
Revised: This Reviewed Preprint has been revised by the authors in response to the previous round of peer review; the eLife assessment and the public reviews have been updated where necessary by the editors and peer reviewers.
Read more about eLife’s peer review process.Editors
- Reviewing EditorJesse GoldbergCornell University, Ithaca, United States of America
- Senior EditorAndrew KingUniversity of Oxford, Oxford, United Kingdom
Reviewer #1 (Public review):
This work by Antonnen et al. was triggered by claims of auditory-mediated effects on altricial avian embryos which were published without any direct evidence that the relevant parental vocalizations were actually heard. I agree with Anttonen et al. that, based on the available evidence about avian auditory development, those claims are highly speculative and therefore necessitate more direct experimental verification.
Attonen et al. have embarked on a comprehensive series of experiments to
(1) Better characterize acoustically the relevant parental vocalizations (heat whistles; in a separate preprint, not reviewed here)
(2) Characterize the auditory sensitivity of zebra finches at various stages of their posthatching development. Despite the long-standing importance of the zebra finch as a songbird model in neuroethology of learned vocalizations, the auditory development of the species had not been studied so far.
(3) Explore an alternative hypothesis of how the parental vocalizations might be perceived.
The principal method used here is the non-invasive recording of ABR (auditory brainstem response), a standard neurophysiological method in auditory research. The click-evoked ABR provides a quick and objective assessment of basic hearing sensitivity that does not require animal training. Weaknesses of the technique include its limited frequency specificity and low signal-to-noise ratio. The authors are experienced with ABR measurements and well aware of those issues. ABR responses in zebra finches are shown to gradually appear during the first week posthatching and to mature in subsequent weeks, consistent with the auditory development in other altricial bird species studied previously. When matching the acoustic properties of parental heat whistles and auditory sensitivities, hearing of the parental heat whistles by zebra finch hatchlings was convincingly excluded. Although not directly measured, this also convincingly extrapolates to zebra finch embryos. Finally, the authors tested the hypothesis that parental heat whistles could induce perceptible vibrations of the egg and thus stimulate the embryo via a different modality. The method used here was laser doppler vibrometry, an appropriate, state-of-the-art technique that the authors also have proven experience with. The induced vibrations were shown to be several orders of magnitude below known vibrotactile sensitivities in mammals and birds. Thus, although zebra finch vibrotactile thresholds were not obtained directly, the hypothesis of vibrotactile perception of parental heat whistles by zebra finch embryos could also be rejected convincingly.
In summary, even when considering some weaknesses of the techniques (which the authors are aware of), the conclusions of the paper are well supported: Auditory and/or vibration perception of parental heat whistles can be excluded as an explanation for previous reports of developmental programming for high ambient temperatures. As a constructive suggestion towards resolving the apparent paradox, the authors recommend to repeat some of the crucial, previous playback experiments at lower sound levels that better match the natural parental vocalizations.
Reviewer #2 (Public review):
This study by Anttonen, Christensen-Dalsgaard and Elemans describes the development of hearing thresholds in an altricial songbird species, the zebra finch. The results are very clear and along what might have been expected for altricial birds: at hatch (2 days post-hatch), the chicks are functionally deaf. Auditory evoked activity in the form of auditory brainstem responses (ABR) can start to be detected at 4 days post-hatch but only at very loud sound levels. The study also shows that ABR response matures rapidly and reaches adult like properties around 25 days post-hatch. The functional development of the auditory system is also frequency dependent with a low to high frequency time course. All experiments are very well performed. The careful study throughout development and with the use of multiple time-points early in development is important to further ensure that the negative results found right after hatching are not the result of the experimental manipulation. The results themselves could be classified as somewhat descriptive but, as the authors point out, they are particularly relevant and timely. Since 2016, there has been a series of studies published in high profile journals that have presumably showed the importance of prenatal acoustic communication in altricial birds, mostly in zebra finches. This early acoustic communication would serve various adaptive functions. Although acoustic communication between embryos in the egg and parents has been shown in precocial birds (and crocodiles), finding an important function for pre-natal communication in altricial birds came as a surprise. Unfortunately, none of those studies performed a careful assessment of the chicks' hearing abilities. This is done here, and the results are clear: zebra finches at 2 and 6 days post hatch are functionally deaf. Since, it is highly improbably that the hearing in the egg is more developed than at birth, one can only conclude that zebra finches in the egg (or at birth) cannot hear the heat whistles. The paper also ruled out the detection on egg vibrations as an alternative path. The prior literature will have to be corrected, or further studies conducted to solve the discrepancies. For this purpose, the "companion" paper on bioRxiv that studies the bioacoustical properties of heat calls from the same group will be particularly useful. Researchers from different groups will be able to precisely compare their stimuli.
Beyond the quality of the experiments, I also found that the paper was very well written. The introduction was particularly clear and complete (yet concise).
Weaknesses:
My only minor criticism is that you don't discuss potential differences between behavioral audiograms and ABRs. Optimally, one would need to repeat the work of Okanoya and Dooling with your set up and using the same calibration. The ~20dB difference might be real or it might be due to SPL measured with different instruments, at different distances, etc. Either way, you could add a sentence in the discussion that states that even with the 20 dB difference in audiogram heat whistles would not be detected during the early days post-hatch, but that adding a (novel) behavioral assay in young birds could further resolve the issue.
More Minor Points.
(1) As mentioned in the main text, the duration of pips (form pips to bursts) affects the effective bandwidth of the stimulus. I believe that you could give an estimate of this effective bandwidth given what is know from bird auditory filters. I think that this estimate could be useful to compare to the effective bandwidth of the heat-call which you can now also estimate.
(2) Fig 5b. label the green and pink areas as song and heat-call spectrum. Also note that in the legend you say: "Green and red areas display the frequency windows related to the best hearing sensitivity of zebra finches and to heat calls, respectively". I don't think this is what you meant. I agree that 1-4 kHz is the best frequency sensitivity of zebra finches but you probably meant green == "song frequency spectrum" and pink == "heat call spectrum". In either case the figure and the legend need clarification.
(3) Fig 5c. Here also, I would change the song and heat-call labels to "song spectrum", "heat call spectrum". You don't want readers to think you used song and heat calls in these experiments (maybe next time?). For the same reason, maybe in 5a you could add a cartoon of the oscillogram of a frequency sweep next to your speaker.
(4) Methods. In your description of the stimulus, you describe "5ms long tone bursts" but these are the tone pips in the main part of the manuscript. Use the same terms.
Comments on revisions:
In the latest version of this manuscript, Anntonen et al have diligently addressed all the issues raised by the reviewers. As I mentioned in our discussions among reviewers, it is impossible to "prove" a null hypothesis and both methods and experimental design could always be improved. At this stage however, they provide convincing evidence that the sound intensity of heat calls are below the hearing thresholds of zebra finch chicks.
Reviewer #3 (Public review):
Summary
This study aims to contest recent findings that prenatal exposure to natural sounds and anthropogenic noise before hatching affects development and fitness in an altricial songbird. To this aim, it attempts to estimate hearing capacities of zebra finch nestlings. It first uses responses to clicks in nestlings and adults to estimate differences in hearing thresholds but uses experimental parameters that systematically lower nestling responses. It then measures responses to tones but restrict nestling data to a protocol (long tones) that failed in adults; response to tones with a correct protocol (short tones) is repeated in adults only. Thirdly, it includes data on loud airborne sound making eggs vibrate, even though this has no relevance to embryonic vibration perception by direct contact with the incubating parent or in incubators. Lastly, it includes a lengthy discussion on how these results, even though inaccurate or incorrect, would show that zebra finch nestlings and embryos are "functionally deaf". It fails to note that even if the experiment had been performed correctly and still failed to detect an auditory response in 2 day hatchlings - which is unlikely given the above and findings in other songbirds - this would not somehow eliminate the developmental effects of prenatal sounds that have been empirically demonstrated.
Strength:
The study is not performed adequately to bring reliable answers, but it addresses the important topic of hearing development in altricial songbirds and the long-held (but untested) assumption that altricial avian embryos cannot hear. More broadly, there is a need to reassess avian auditory perception - and the methodological approaches to measure it - given the accumulating evidence that some bird species respond to high frequency biological sounds beyond their known hearing range.
Weaknesses:
The study presents many experimental flaws that specifically compromise response detection in immature animals in the first experiment, and data from the remaining two experiments are invalid. The revision did not fix any of these issues.
i) Response to clicks, Fig 1: Unlike what the revision claims, the deviations from validated protocols (too rapid stimulation, too few measurements, low temperature, reliance on clicks only) do lead to a potentially large underestimation of nestling hearing sensitivity. Calculation and new data trying to show that these deviations would not matter are wrong or insufficient. Even without strict conventions on ABR methodology, it is striking that every single experimental choice made here i) greatly differs from other avian studies and ii) reduces - rather than maximises - response detection, specifically for low amplitude signals (as in nestlings or near thresholds).
ii) Response to frequency tones, Fig 2: The experiment on frequency sensitivity (long tone burst) failed in adults (positive control) with 0 to only about half of the adults responding (Fig S1), and sensitivity underestimated by 30dB (Fig2). Measures with a failed positive control are invalid, even if the overall pattern of the few data points obtained in nestlings vaguely resemble (but does not match) expectations. That the experiment was repeated in adults with a correct protocol (short tone pips) - but not in nestlings - is highly misleading.
iii) Attempts to validate the protocols above by comparing to published adult values are meaningless (response A.3.1; Fig 5). The one experiment being compared (short tones) was only performed in adults in this study. This cannot validate results obtained by different methodologies in nestlings, for responses to clicks or long tones.
iv) Vibrations: No previous results on the effect of zebra finch heat calls on development rely on the hypothesis or assumption that airborne sound from heat calls makes eggs vibrate. This idea is solely attributable to the authors of the preprint, and is not biologically or experimentally realistic. All speculations from this experiment (Fig3) on vibration perception by embryos or heat call effects are meaningless.
v) Writing and presentation: The text throughout is highly misinformative for non-specialists or any reader not carefully inspecting figures (including in supplementary material) and methods. The confusion is greatly aggravated in the (6-page long) discussion which i) fails to recognise and account for the study shortcomings, and instead ii) greatly overstates the results and what they mean, and iii) misrepresents current knowledge by excluding highly relevant studies showing evidence of early sound perception in embryos and hatchlings, and introducing many errors in the presentation of published papers. This creates an illusion of a strong mismatch between heat-calls and zebra finch sensory capacities, for which the study actually does not provide any evidence for, and which is extremely unlikely to exist.
vi) The revision did not address any of the major flaws of the study outlined above (see detailed assessment below). In particular,
** For point i):
- estimations for the effect of having done too few (400) measurements are wrong - the effect on hearing thresholds cannot be calculated, but would be much greater than 4dB with the expected 37% noise reduction with the standard 1000 sweeps;
- the new data provided does not measure the impact of high stimulus rate, and measures on adults largely underestimate effects on nestling response;
- body temperature, now provided in the revision, is at the lowest extreme for the species, which may increase hearing thresholds;
- tones do elicit a stronger and earlier response than clicks. Whether this is related to stimulus duration does not change the fact that clicks underestimate hearing thresholds, and delay hearing onset by several days.
** For points ii) and iv):
No new data or any valid explanation was provided in the revision. It is still the case that nestling frequency responses were obtained with an experiment where the positive control failed; and the vibrating egg experiment is irrelevant to vibration perception in embryos and any observed effects of heat calls on development.
** The revision greatly lengthens the speculations about heat call perception, based on inaccurate or totally incorrect data.
Conclusion and impact:
i) Overall, the study fails to provide any reliable estimate of zebra finch nestling hearing capacities: it underestimates hearing onsets and thresholds (clicks) and gives no information on nestling frequency sensitivity. It is extremely likely that a better designed ABR experiment, or a more sensitive methodology (e.g. electrophysiology), would have detected a response in 2 day-old nestlings, as in other songbirds. The conclusion of "deafness" in hatchlings (or embryos, which were not tested) is clearly unsupported.
If zebra finch hatchlings were clearly deaf, a well-designed study would have shown this a lot more convincingly.
ii) The data on adults in not new (3 prior studies) - although this study generally underestimates zebra finch high frequency sensitivity. The presentation in relation to heat-calls is flawed: true values of heat-call frequency range and sound levels (>6kHz at 45dB) fall within the adult hearing range.
iii) Without any new evidence, this study does not progress our understanding of heat-call and noise impact on development. Exactly the same issue remains: that heat-call and noise effects on development contradict the general VIEW on hearing ontogeny in altricial birds. But we have learnt nothing from this study on hearing ontogeny or frequency sensitivity. The study provides no reliable neuroscience data to advance the debate.
iv) The largest section of the preprint is a highly speculative discussion, based on erroneous data and wrong interpretations, as well as a misrepresentation of what is known. That these issues would not be recognised is - in my view - of serious concern.
Detailed assessment:
The summary by the authors of my major concerns (R3.A0) is incorrect and misreport many of my statements, without giving any meaningful answers. I will not engage in such discussion.
My actual three major concerns do remain:
(1) Results on Fig 1 overestimate hearing onset and thresholds: All experimental parameters chosen to test responses to clicks are known to lower detection. From their cumulative impact, there is absolutely no doubt that the data in Fig 1 underestimate hearing capacities, and disproportionately so in nestlings compared to adults. Therefore, no quantitative estimate of nestling hearing threshold, absolute or relative (i.e. the estimated "54dB difference"), can be taken from this study. The age of hearing onset based on clicks (4 day old) is also wrong.
(2) All results on Fig 2 are false: 40 to 100% of adults (positive control) failed to respond within their normal hearing range (Fig S1). Data on nestling frequency sensitivity using this methodology (Fig 2) are clearly invalid.
(3) All results on Fig 3 are irrelevant: they assume zebra finch parents are hoovering in front of their nest while heat-calling rather than incubating their eggs, which is nonsense. Any speculation on the role of bone-conduction or vibrotactile stimulation for embryonic heat-call detection is simply unfounded.
The authors' responses to these comments are largely mistaken (see below), and do not change the 3 facts stated above. Overall, the data produced are unreliable, and so are the interpretations and conclusions.
The conclusions that i) heat-calls fall outside of adult hearing range and ii) young nestlings (and embryos) are deaf, are both incorrect. The study provides no actual estimate of nestling hearing and how far off their hearing range heat-calls fall.
(1) Responses to clicks underestimate hearing abilities, specifically in nestlings.
(i) DISPROPORTIONATE EFFECT OF PROTOCOL ON NESTLINGS: As reported in other avian studies (e.g. Brittan Powell et al 2004), because of their immature neural system, nestlings show low amplitude waveforms compared to adults. This occurs even with sound much louder than their hearing threshold. For example here, 8 day old nestlings show waveforms of only low amplitude at 95dB, even though they respond to sound 40dB softer, at 55dB (Fig 1H).
This characteristic of nestling waveforms means that:
- nestling responses are harder to detect,
- nestling responses are more easily attenuated below the detection criteria (>2 S/N),
- a low amplitude response in nestlings at a given sound level does not predict that softer sounds will not be perceived by the animal.
Any deviation in protocol that attenuates waveform amplitude will therefore disproportionately affect nestling thresholds (and artificially lead to the "54dB" estimate).
Even without universal standards (resp R3.A1.1), knowing this, the protocol should be adjusted to maximise response detection. This study does exactly the opposite.
(ii) INSUFFICIENT MEASUREMENTS: using only 400 sweeps, rather than the typical 1000 sweeps, reduces response detection, especially in nestlings.
- The claim that using 1000 sweeps would only decrease the hearing threshold by 4dB (response A3.2; ms L530) is false:
- Based on the square root relationship mentioned by the authors, using 1000 averages instead of 400 would improve the signal-to-noise ratio by 37%, which would allow detecting many small amplitude waves which are currently hidden in the abnormally high noise.
- Lowering the noise floor level by 4dB does not mean that the hearing threshold would only decrease by 4dB. The improvement in hearing threshold would be much greater, especially in nestlings.
(iii) UNSUITABLY HIGH STIMULATION RATE: the new data on pairs of clicks greatly underestimate the attenuation by high stimulation rates, and so do adult measurements compared to nestlings'.
- the click rate used in this study (25 clicks per second) is 5 to 25 times faster than most previous studies in young birds (e.g. Saunders et al 1973, 1974: 1 stim/sec or less; Katayama 1985: 3.3 clicks/sec; Brittan-Powell et al 2004: 4 stim/sec), and 6 times faster than zebra finch heat-calls.
- responses to pairs of clicks (new data in Fig S3; L 543-552, response A3.3) does not measure the response dampening caused by high stimulation rates. Response attenuation (adaptation) after a single click is much weaker than after a train of 400 consecutive clicks (or even just 30). This paired-click measure ignores the cumulative attenuation observed with many consecutive stimuli. Paired-click paradigm is used to measure immediate refractoriness for other purposes (e.g. temporal resolution, diagnosis tool) but does not replicate high stimulation rates.
It is unclear why the authors chose to use this weak approximation rather than simply replicating the measurements at the same slow rate as in other avian studies. This would have given a straightforward answer, comparable to previous studies that have demonstrated the detrimental impact of fast rate on response strength by directly comparing responses to different stimulation rates (e.g. Saunders et al 1973; Brittan-Powell et al 2004).
- Adults are less sensitive to high stimulation rates than immature individuals (e.g. Saunders et al 1973; Khayutin 1985; Brittan-Powell et al 2004 and 6 references cited therein). Effects of fast rate in adults (new data in Fig S3) therefore largely underestimate effects on nestlings (not measured), and the high stimulation rate used in this study increases the relative difference between nestlings and adults.
- Given the 2 points above, it is incorrect to conclude from this new data that the high stimulation rate used had "no effect on ABR amplitude or thresholds" (responses A3.3 L551). Instead, given that 40ms (i.e. interval for 25 clicks/ sec) is at the limit of what adults can handle after a single click, this new data does confirm that the stimulation rate is indeed too high and underestimates hearing in nestlings (and adults to a lesser extent).
(iv) LOW BODY TEMPERATURE can reduce ABR response.
- The average body temperature (39.5C) now provided in the revised manuscript (response A2) is at the lowest extreme of the range for zebra finches. The normal average body temperature for zebra finches is 41C at low ambient temperature, rising to 43-44C at high ambient temperatures (when heat-calls would be produced). This value of 41C is consistent across many studies in wild and domestic zebra finches (e.g. Wojciechowski et al 2020 [avr 41C at 23C]; Udino and Mariette 2022 [avg 41, min=40C at 32C]; Bech and Midtgard 1981 [avr ~41C]; Pessato et al 2022 avg=41C at 27C]). The only study reporting a body temperature average as low as 39C (Cooper et al 2020) was indeed under hypothermic conditions, obtained in adult zebra finches under extreme fasting conditions (17hrs of food deprivation), at ambient temperature below thermoneutrality, during the night (i.e. during "nocturnal hypothermia", when bird body temperature is normally lower).
Therefore 39.5C does corresponds to hypothermic conditions for most individuals. While this body temperature remains considerably higher than that used experimentally to supress hearing response, using a below-normal body temperature, added to other factors, may lower wave amplitude and therefore increase hearing threshold estimates.
(v) CLICKS UNDERESTIMATE HEARING ONSETS
- My statement that, compared to tones, clicks elicit a smaller response, at a later age, is correct (Saunders et al 1973; Brittan-Powell et al 2004).
- It does not matter whether this is due to differences in stimulation duration (response R3.A2.1), since clicks are always much shorter than tones. What matters is that hearing onset based on responses to clicks has been found to underestimate the earliest age at which an auditory response can be obtained by several days (Saunders et al 1973).
- Without any valid nestling data for tones (see below), this study, based on clicks only, does not provide the true age of hearing onset.
- The suggestion of using 170dB clicks (response R3.A2.1) is very odd. The correct approach would have been to use a correct protocol for tones in nestlings, rather than solely correcting it for adults (see below).
(vi) CONFUSING INTERPRETATION OF WAVE AMPLITUDE AND LATENCY
- the text implies throughout that nestlings lacking an adult-like amplitude and latency is a sign of poor hearing (e.g. L122 "ABR wave I gradually reaches maturity 25 days after hatching").
- It should be clarified that this is a characteristic of immature systems but does mean these nestlings do not hear. For example, this characteristic persists even in 10d old nestlings which have similar hearing thresholds to adults.
(2). Results on nestling frequency sensitivity are invalid. Using long (25ms) tones with subdermal electrodes is incorrect, and not used by anyone other than the authors. The failure to repeat the experiment with a correct protocol (5ms tones) in nestlings is misleading:
(i) When 60% of 4-day old chicks respond to clicks (Fig 1), they are described as "functionally deaf" (L78, L261). By contrast, when 0% to 60% of adults respond to tones in the core of their hearing range (Fig S1 for data shown in Fig 2), this is merely presented as a methodological limitation (text added L186-197), and the authors still proceed to presenting results on nestlings with a method that failed in adults (positive control).
(ii) When the positive control fails, the experiment is failed. This principle applies in Neuroscience as in any scientific field.
(iii) That the experiment repeated in adults with the standard and correct short tone protocol (5ms) gave normal results, is not a validation. Instead, it proves the point that 25ms is unsuitable (regardless of whether that is due to rising time, L399). This correction does NOTHING to fix results in nestlings, which were ONLY done with the unsuitable 25ms tones.
(iv) The mixture of adult data with 5 and 25ms tones, instead, creates confusion, because differences in protocols between nestlings and adults are blurred in the text. The abnormally small proportion of adults responding (0 to 60%) with 25ms tones is only shown in supplementary material, and attenuated in the main text (L186: "about half").
(v) The claim (response R3.A1.2) that long 25ms tones is commonly used with the ABR methodology used here is false:
** ALL (but 1) avian studies using tones of 20ms or longer (cited by myself or by the authors in their reply R3.A1.2) used a different ABR methodology, with electrodes implanted through the skull. The only exception, using 25ms tones with subdermal electrodes (as here), is a study by the authors themselves.
** All other avian studies with subdermal electrodes used short tones, of 5ms or less (e.g. Brittan-Powell et al 2002, 2004; Henry & Lucas 2008), as in the corrected adult experiment.
** My initial comment already specified this difference in electrode placement.
** The results here (failing in adults) unquestionably show that the method of long tones with subdermal electrodes does not work, and the literature shows that no one else uses it.
(vi) When the aim of the study is to contest effects of high frequency sounds (L39-45), it is odd to choose a protocol specifically directed at testing responses to very low frequencies (responses A3.1, R3A.0; L398-403) and that compromises all results.
(vii) That the shape of the few data points obtained in nestlings with long tones would broadly resemble expectations (responses A3.1, R3A.0) is not a validation: See ii.
- The shape is not even correct:
** Why aren't 4 and 6 day old nestlings responding to any frequency when they were responding to clicks (in spite of poor detection conditions for clicks)?
*** Why are they not responding, when 2 day old flycatchers respond to tones from 1 to 4kHz at 45dB, and 0.5 to 5kHz at 60dB (Aleksandrov and Dmitrieva 1992, Korneeva et al 2006)?
(viii) That only relative measures between nestlings and adults matter (resp R3.A4; L404) is incorrect. Measures that are qualitatively (see vii) and quantitatively (see i) wrong cannot be compared.
If these data with long tones were indeed acceptable, why repeat the experiment in adults with a correct protocol, even before this flaw was pointed to during the review?
(ix) The unusually low number of measurements (400 instead of 1000; L530) will have reduced detectability of low amplitude responses, in nestlings and near thresholds, here as in the click experiment (see above). The claim that this would only increase threshold by 4dB (responses A3.2, L530) is wrong (see above).
(x) There is no explanation as to why only half of the 6-day old nestlings (n=5-6) were tested with tones. Would having 10 in this group shown a response at 6-day old?
(xi) Even the correct 5ms tone protocol in adults overestimated thresholds at higher frequencies (>3kHz) by up to 30dB compared to other published estimates (Fig 5). If inter-population differences among domestic zebra finches (L 393; Fig 5 legend; resp R3.A4) were enough to cause 30dB differences, results on domestic zebra finches here should not be extrapolated to those on wild-derived Australian zebra finches documenting developmental effects of heat calls.
The authors give no other elements than the above in their responses that could demonstrate the validity of their nestling frequency data.
Based on other studies, we can expect zebra finch hearing to develop sensitivity to high frequencies after that to middle frequencies. But pretending that this study provides any evidence towards this is wrong. There is no valid data.
(3) The experiment using loud sounds to make eggs vibrate is biologically and experimentally meaningless. The claim that these measurements would rule out vibration perception in embryos is totally unfounded. The preprint is creating the illusion of having ruled-out a mechanism that they have not tested.
(i) zebra finches are not hovering in front of their nest when heat-calling. They are in physical contact with the eggs while incubating, with vibrations expected to travel directly through solids from adults to eggs, without attenuation.
(ii) the claim that previous studies on heat-call developmental impact rely on the assumption of airborne sound making egg vibrate (response A3.5, R3.A8) is incorrect. This is conceptually wrong and there is no indication of this in any paper.
(iii) vibration perception in embryos in birds and other taxa (e.g. amphibian, reptiles and insects) rely on direct contact with the source, not on loud airborne sounds shaking eggs. Beyond any consideration on heat-calls, claiming that this experiment could give any indication of vibration perception in embryos is nonsense.
The authors give no information in their responses that could demonstrate the validity of this experiment.
(4) Interpretation and discussion
All other songbird studies, individually and collectively, show much greater hearing sensitivity in nestlings that what this study is trying to suggest (e.g Khayutin 1985; Korneeva et al 2006; Aleksandrov and Dmitrieva 1992; Rivera et al 2018; Platzen and Magrath 2004; Haff & Magrath 2012). The only way the authors can reach their conclusion is by:
- presenting data that greatly underestimate hearing sensitivity in zebra finches (see sections 1 and 2) and overstating them, and;
- misrepresenting current knowledge by excluding relevant papers and being unclear about what the literature shows.
This study tries to impose the idea that zebra finch do not detect any sound before day 4-6 post-hatch, and have extremely rudimental hearing until day 8-10 post-hatch. By contrast, other studies show very young hatchlings respond to sound 1 to 3 days after hatching (first age tested) and show quite sophisticated, and totally functional, responses to relevant sounds at 5 days old.
This is not to say that hearing does not continue to improve post-hatch in birds, or that sensitivity to mid frequencies post-hatch would not precede that to high frequencies. But statements throughout this study are so exaggerated and/or wrong that nothing can be learnt. It is undeniable that this study fails to provide the useful and balanced assessment needed to establish were true heat-calls actually sit relative to zebra finch adult, nestling and embryonic hearing range.
It is literally impossible to correct every wrong statement in the discussion and responses to reviewers. I focus here on some examples related the claims of "nestling deafness" or of heat-calls being outside of adult zebra finch hearing range, as well as inaccuracies leading to an apparent match with current literature.
(i) MISALIGNMENT WITH OTHER STUDIES AND MISREPORTING
*** Neurological evidence
- Highly relevant evidence on response to sound in zebra finch embryos (Rivera et al
2018) is totally excluded.
Excluding this study on the basis that it used a different methodology that does not directly quantifying auditory sensitivity (resp R3.A6a) is a poor justification. Evidence, even indirect or imperfect, should be brought to the attention of the readers.
- This applies to many other studies cited in my first review and arbitrarily excluded here. If one wants to conclude on "deafness", all evidence, even indirect, should be considered. Excluding non-ABR studies means the conclusion cannot be extended beyond flat ABR traces.
- Other studies show much greater sensitivity that what the text describes:
* Flycatcher hatchlings at 2-3d post hatch (first age tested), respond across a wide range of frequencies (0.3 to 5kHz), at low to moderate sound levels (45-65dB)
(Aleksandrov and Dmitrieva 1992, Korneeva et al 2006).
* Stating that these studies in flycatchers "likely yield lower thresholds" (L364) is an astonishing understatement. Thresholds in Aleksandrov and Dmitrieva (1992) at 2-3 day old were 35 dB lower than those here at 4 day old with clicks, and 60 to 80dB lower than those with tones of 1-2kHz at 8 day old.
* Claims that "sensitivity improves rapidly postnatally, with ~40 dB threshold decreases (L365)" is also misreporting these studies' findings. Thresholds decreased by 25dB consistently at 9 out of 11 frequencies tested from 0.3 to 8kHz (Aleksandrov and Dmitrieva, 1992). A difference of 40dB was only found at 5-6kHz (Aleksandrov and Dmitrieva, 1992). Likewise, improvement also varied from 25 to 40dB in Korneeva 2006. These do not average to "~40 dB".
* Even birds developing 4 times slower than songbirds (budgerigars) show a response at 5 day old. My statement that Brittan-Powell 2004 shows an auditory response at 5d old is correct. Re-response R3.A2.2: Fig 1B shows one example for ONE individual. All other figures based on multiple individuals shows at least some individuals responded at 5-6 days old at frequencies less than 4Khz (Fig 1C, 4 and 5).
- Many inaccuracies on avian hearing remain uncorrected in the revision.
* e.g. L 329: extrapolating high frequency hearing (>6khZ) from precocial species is incorrect because even adult chicken and ducks are not sensitive to high frequencies.
The authors imply elsewhere that species of songbirds cannot be compared (resp A4, R3.A6), but make extrapolations from species that are far more remote, phylogenetically, developmentally and ecologically than other songbirds.
*** Behavioural evidence
- contradicts this study findings:
* When correctly cited and described, the literature, does not support the authors' statement that nestling behavioural response "typically emerges between ~5-10 days post-hatch" (L358). It emerges earlier, at an unknown age, including potentially from hatch (present at 1.5day) for innate responses (see below).
* Results in other songbirds are not consistent with this study finding that a "response to loud click stimuli is first detectable at 4-8 days post hatch" (L230). Instead they show nestling hearing capacities described here are abnormally poor.
* Therefore, the conclusion that "The timeline of behavioural studies closely matches the onset and maturation of ABR responses observed here in zebra finches" (L360) is wrong.
- shows a very early response (1-2day post hatch), with no known onset:
* songbird behavioural response to sound, with parental alarm call suppressing begging, has been demonstrated in nestlings as young as 1.5 or 3 days old (Khayutin 1985, Korneeva et al 2006, Aleksandrov and Dmitrieva 1992). None of these results are mentioned in the revision when discussing behavioural evidence (L357-360).
* Instead, they exclusively mention studies that started testing nestlings at 5-6 days old, or much later (e.g. 17 day old: Suzuki 2011; 14 day old: Barati & McDonald 2017).
* ALL of these studies (cited or not) demonstrated a significant response of nestlings to calls on the first age tested. NONE tested the onset of this response.
* the one study looking at progression across 3 ages, at 5, 8 and 11 day old shows parental alarm calls suppress nestling calling at day 5 as much as later on, with no effect of age (Platzen and Magrath 2004). The authors failed to acknowledge this in their response (resp A4) or revision (L359).
* the claim that Haff & Magrath (2012) showed nestlings did not respond at 5-6 day old but did at 10-11 days (resp A4) is wrong. At 5 day old, they responded to their own species alarm calls, as well as to another similar sounding species and to the sound of predators themselves (Table2 in Haff & Magrath 2012; as in Platzen and Magrath 2004).
- learning, not just hearing, improves nestling response with age:
* Haff & Magrath (2012) showed that by 10-11 day old, nestlings had learnt to also respond to heterospecifics, demonstrating that learning improves nestling response with age.
* the intensity of the response to low frequency sound improved more with age than that to high frequency calls. If improvement were related to hearing limitations, the opposite would be expected (Haff & Magrath (2012).
- nestlings discriminate complex calls, including at high frequency
* By 5-6 day old, nestlings can already discriminate several different sounds indicative of danger, among the complex natural acoustic background (Haff & Magrath 2012).
* nestling do not respond indiscriminately to any calls, but only to relevant sounds that specifically present a threat to them (Haff and Magrath 2012; Magrath et al 2006).
* the idea that nestlings only distinguish "low frequency broadband cues" (L362) is inaccurate (resp R3.A6). Nestlings respond to scrubwren chip calls and fairywren alarm calls that are narrowband calls with the fundamental at 8 and 10 kHz respectively (Platzen and Magrath 2004; Haff and Magrath 2012).
* These studies indeed "do not imply mature auditory sensitivity" (L362), they show that auditory maturity is not needed to show a perfectly functional response to biologically meaningful sounds in a natural context.
- Overall, every other songbird species tested shows greater hearing sensitivity than that proclaimed here for zebra finches. It is very unlikely that zebra finches would be such an outlier.
(ii) INCORRECT CONCLUSION ON DEAFNESS
Deafness of young zebra finch nestlings cannot be demonstrated because:
- the study has no valid response to tones in nestlings to establish the age of hearing onset.
- responses to clicks are greatly underestimated (see 1). Had correct, more sensitive, protocol parameters been used, it is very likely that:
* Most 2 day old nestlings would have responded to clicks, instead of 60% of 4 day old nestlings.
* Thresholds would be lower, especially in nestlings.
The >54dB difference between nestlings and adults based on an assumed 95dB threshold in 2d old nestlings is wrong.
- based on data on other songbird nestlings, a difference of 25dB would be more realistic (at frequencies of 1-2 kHz, comparable to clicks, Aleksandrov and Dmitrieva 1992, Korneeva et al 2006). This greatly contrasts with the >54dB estimate here. While the authors qualify their estimate as "conservative" (legend Fig4, L293), it is actually greatly overestimated.
- Even assuming the data in this study were correct, the interpretation is erroneous. Concluding "deafness of young nestlings" is incorrect when 60% of 4 day old nestlings respond to clicks at 80dB. This is especially wrong given that the ABR method systematically overestimates thresholds by 20-40dB.
- That ABR is used in humans to diagnose deafness (L263) does not make ABR the most suitable method for birds, when evidence shows that other methods (e.g. electrophysiology or behaviour) are more accurate. Hearing screening in humans can only use non-invasive methods, and has additional criteria than accuracy (price, ease, etc).
- The discussion fails to acknowledge the implications of the limitations of the study (detailed above). For example, talking in broad terms of differences in protocols (L392-395), does not tell readers that this study, because of the parameters chosen, led to an underestimation of zebra finch hearing capacities.
The discussion instead greatly overstates what the study shows (e.g. L229-232, 261, 277-278, 288, 332, 340, etc).
(iii) INCORRECT CONCLUSION THAT HEAT-CALL FALL OUTSIDE THE ADULT HEARING RANGE.
- heat-calls fall outside the adult hearing range solely because of the authors' decision to:
* restrict heat-call frequency range to the authors' own estimation (7-10kHz) on 4 birds instead of using published values that caused developmental impact (e.g. Katsis et al: 6-10kHz), or were produced in vitro (5.9kHz; Anttonnen et al 2025);
* lowering heat call sound level (34dB at 10 cm) to measurements on 4 isolated birds under unknown temperature conditions for an unknown amount of time, when the same paper gives values of 43.4 dB at 1 m (range: 30.7-53.2) in standard in vitro conditions.
* As soon as EITHER of these two values is corrected, the statement that heat calls are outside zebra finch adult hearing range is false.
* In addition, assuming constant heat-call sound level across contexts is unreasonable. That zebra finch can produce inspiratory syllable very similar to heat calls and during inspiration at 65dB during song (Goller & Dalley 2001) argues against the assumption that heat-calls are always soft.
- Other species also show perception, not just production (resp R3.A10a), of calls above their known hearing range (10-20kHz; e.g. Duque et al 2020). The zebra finch is not the only case in birds of mismatch between signals perceived and known hearing range.
Reviewer #4 (Public review):
Reviewing Editor:
There is a virtuous circle between behavior and neuroscience. Sometimes neuroscience identifies a signal that no behavioral study alone could discern: place cells in rats, replayed song sequences in sleeping birds, compass-like signals in the central complex of the fruit fly. Sometimes behavioral observation is what inspires neuroscience: precise measurements of short and long latency reflexes implicate different neural pathways, and directed escape responses in fish are so fast that they require specialized and lateralized escape circuits. And sometimes a behavioral claim requires an animal's sensory system to possess a capacity nobody had documented. A prime example is bat echolocation: Spallanzani inferred in 1793 that bats navigate by hearing, but the claim was dismissed for over a century because the signal he proposed could not be detected. It was vindicated only when Griffin and Galambos measured the ultrasonic emissions directly in 1940, and the loop closed fully when Suga and colleagues found cortical neurons in the mustached bat tuned to precisely the echo delays and Doppler shifts the behavior required.
In this manuscript we are faced with a fascinating and contemporary instance of this important dialogue between behavior and neurophysiology. Several high profile papers have reported that incubating zebra finch parents produce high frequency "heat calls" when ambient temperatures rise, and that playback of these calls to eggs during late incubation alters offspring growth, begging behavior, thermal preference, and reproductive success in adulthood. That function requires that the embryo be able to sense, presumably to hear, the heat calls. This is textbook ecology and often cited as the prime example of adult behavior affecting the development of their unborn (or unhatched) offspring.
Yet the auditory capacity of very young zebra finches had never been carefully examined. This paper does exactly that, using auditory brainstem responses, a method that detects synchronous volleys of afferent input through low levels of the auditory system. ABRs are not perfect and may miss very subtle or sparsely represented signals, but they are a time-tested way to assess hearing capacity and the development of a system.
Here, the authors show, convincingly in my view and in the views of Reviewers 1 and 2, that 2 DPH hatchlings have no detectable ABR to a 95 dB SPL broadband click, and that sensitivity then rises progressively across the first two postnatal weeks. This is the most consequential result, since it bears directly on whether an auditory route to heat call perception is feasible at all. A second finding is that ABR wave I amplitude continues to mature until 20 to 25 days post hatch, coinciding with the onset of sensory song learning, just as young finches need to form a template of an adult male song to copy.
The key question relevant to mediating this review process is: If a two-day-old hatchling shows no detectable auditory brainstem response, over 400 averaged sweeps, to a 95 dB SPL broadband click, in 14/14 animals tested, then how could that same animal, two days earlier and inside an egg, have been sensitive to a far weaker stimulus of roughly 33 dB SPL at 6.8 kHz?
Below I set out the considerations that influenced my judgment as I handled these reviews.
Strengths:
The developmental series is the strength of the design. Seven ages, with multiple early time points, means the negative result at 2 DPH is not a lone flat trace but sits at one end of a graded and internally consistent trajectory. Body temperature was monitored and held within {plus minus}0.5{degree sign}C, and differed by no more than 0.6{degree sign}C across age groups. Every stimulus parameter was applied identically at every age, so the developmental comparison is a within-method one. The vibrometry experiment addresses the most obvious alternative modality with an appropriate and state-of-the-art technique.
The key findings related to the development of the ABR response and, presumably, the hearing capacity. At two days post hatch, the authors presented broadband clicks of 20 µs duration at 95 dB SPL peak equivalent, a stimulus carrying energy across the full spectrum including the 6.8 kHz of the heat whistle. Clicks were delivered at 25 Hz with a 40 ms inter-stimulus interval, 400 presentations per condition with alternating polarity, and responses were scored both by an automated signal-to-noise criterion and by independent visual inspection. No response was observed in any of the 14 animals tested. Two days later, under the same protocol, eight of thirteen animals responded, with a mean threshold of 80.6 {plus minus} 1.6 dB SPL and wave I latencies of roughly 4.0 to 4.7 ms against 1.8 to 2.5 ms in adults. These responses were small, broad, and slow, the signature of an immature auditory system. By 6 DPH nine of ten animals responded, and from 8 DPH onward every animal did at every age tested. Adult thresholds settle at 40.6 {plus minus} 4.0 dB SPL, more than 54 dB below the 2 DPH value. The 4 DPH data show the preparation resolves weak, desynchronized responses under exactly the parameters used at 2 DPH, and that sensitivity emerges on a trajectory consistent with auditory development in other birds and in mammals.
On Reviewer 3's methodological objections:
Reviewer 3 raised a series of objections to the recording parameters: the stimulus rate is faster than in comparable avian developmental studies, 400 sweeps is fewer than the conventional 1000, body temperature sits at the low end of the reported range for the species, and clicks lag tones in developmental onset. Each of these describes a mechanism that would reduce the amplitude of an evoked response relative to some ideal stimulus. But in aggregate my take was that none of these would completely abolish a response that is detectable two days later. That distinction is the crux of my reading and others may disagree. A response reduced by 70 percent is still a response, and the question at 2 DPH is not why the trace was small but why there was no trace at all over 400 averages in all 14 animals tested.
Reviewer 3's concerns are difficult to translate into threshold shifts, and on the narrow point that amplitude reductions do not map cleanly onto decibels, the difficulty that the reviewer faced in converting stimulus concerns to impact on dB threshold is well taken. But the figures supplied are themselves bounded: a 37 percent noise reduction from additional sweeps, a 70 percent amplitude reduction from stimulus rate in the youngest birds, a four day shift in apparent onset from using clicks rather than tones. These are large effects. They are not unbounded ones. And because the decibel is a logarithmic unit, in which every 20 dB corresponds to a tenfold change in sound pressure, the gap they are being asked to explain, exceeding 54 dB, amounts to a difference of more than 500-fold.
The 4 DPH data bear directly on this, because every parameter at issue was applied identically at that age. The same 25 Hz rate, the same 400 sweeps, the same temperature, the same click stimulus resolved small, dispersed, long latency responses in 8 of 13 animals two days later. These are precisely the weak and desynchronized responses an immature auditory system is expected to produce, and precisely what the objections predict should have been lost. Whatever theoretically possible deficits in stimulus design, they did not prevent detection of a marginal response in animals two days older, and no mechanism has been proposed by which their cost would fall from total suppression at 2 DPH to negligible at 4 DPH.
A 95 dB SPL broadband click carries energy at every frequency including 6.8 kHz and exceeds the level at which heat whistles arrive at 10 cm by more than 60 dB, before any attenuation by shell or by an incubating parent. Even a substantial underestimate of hatchling sensitivity leaves that gap open, and at 6.8 kHz it is a broadband stimulus being compared against a narrowband signal in the frequency region that matures last, in this dataset and in every developmental series reported.
Sensory systems as matched filters:
A second consideration: sensory systems as matched filters (survival-critical sensory responses are typically associated with expanded sensory sensitivity for them). Failure to detect an auditory response is not proof of functional deafness. An evoked potential measures synchronized population activity, so sparse discharge below the threshold for ABR sensitivity (a population response) can never be excluded. This is the crux of Reviewer 3's concerns.
But this second consideration makes the difficulty of finding any evidence of hearing or vibrotactile responsiveness in these animals more compelling. Rüdiger Wehner, working on desert ant navigation, noted that sensory systems are matched filters. They are tuned to the narrow slice of the world that matters for survival and reproduction and discard the rest. From the tuning of an ant's polarization channel you can infer what it navigates by, and from the work of Capranica we know that the tuning of a frog's inner ear relates to the sound of conspecific frogs. If acoustic or vibrotactile processing of heat calls were genuinely critical to the embryo, natural selection would have built the outsized sensitivity to receive it. Instead there is a greater than 54 dB deficit and a frequency range where nothing is detectable at all. I interpret this as evidence that evolution did not build auditory sensitivity into two-day-old hatchlings, which suggests functional deafness in the embryo.
One might invert this argument and object that the filter in the embryo is precisely for the heat whistle itself, so that neither a broadband click nor a 25 ms tone burst, the only two stimuli presented to 2 DPH animals, is the right probe. Feature detectors that respond to a specific signal while ignoring stimuli of far greater energy are common: cricket AN2 neurons fire to bat-like pulse intervals and stay quiet to loud broadband noise, and anuran midbrain neurons are interval-tuned and silent to spectrally matched noise exceeding the call in level. Embryonic sensory systems also carry transient specializations that later disappear, and the heat whistle is unusually specifiable, narrowband near 6.8 kHz and delivered in rhythmic trains. A detector tuned to that rhythm would not have been engaged by any stimulus used here, since the actual call was never played to any animal at any age.
But feature selectivity is typically computed centrally, downstream of peripheral transduction, and ABR wave I reflects auditory nerve output, below any circuit that could implement pattern selectivity. A central detector still requires afferent input to operate on, and it is that input which seems to be absent here. It's conceivable that the cochlea itself exhibits some very special tuning to the heat whistle and implements some kind of yet-to-be discovered surround suppression at the periphery, such that a click would not be able to activate the hair cells in the heat whistle's frequency range. But 2 DPH animals were also tested directly with narrowband 6 and 8 kHz stimuli at 95 dB SPL, bracketing the heat whistle frequency, also without response. The surviving version of the objection therefore requires a pathway with too few fibers to generate a far-field response, tuned to a temporal structure nobody tested, in an animal whose auditory nerve shows no signal at some 60 dB above the natural signal level.
Caveats:
The paper comes with some caveats, which the authors note in their discussion. First, no embryo was tested. The embryonic claim is an extrapolation from hatchlings. I regard it as a reasonable one, since sound must additionally traverse the shell and since auditory systems gain rather than lose function as development proceeds, but it is an extrapolation nonetheless. Second, frequency-specific thresholds in nestlings were not obtained with a full stimulus set. The low to high developmental sequence therefore rests on a conservative stimulus. Pip data in nestlings would be a valuable addition to the record. Finally, the study offers no pre-neural measure, such as cochlear microphonics or otoacoustic emissions. Such a measure would distinguish a cochlea that is not transducing from one that transduces without synchronized output, and would address the strongest form of the objection raised in review.
Summary:
Absence of evidence is not evidence of absence, and some future study could in principle identify single neuron responses to heat calls in an embryo. The evidence in this paper makes that outcome unlikely in my assessment. It is worth noting what the precedent actually supports. Prenatal hearing is real and well documented in precocial birds: mallard embryos deprived of exposure to their own calls fail to recognize the maternal assembly call after hatching, and chickens show evoked responses well before hatching. But those animals hatch at a developmental stage altricial songbirds do not reach until days later, and the calls involved carry their energy below 3 kHz, the frequency region that comes online first. The claim at issue here requires sensitivity at 6.8 kHz, the region that matures last, in an animal at a far earlier stage. Something may still be happening to the embryo during heat calls, but whatever the mechanism, it is probably not the embryo listening. Behavioral claims that lack strong precedent, such as hearing through an eggshell, need to sit in a virtuous circle with neurophysiological investigation, and this study is what that looks like from the physiological side.